Biobb Machine Learning changelog

What’s new in version 4.1.0?

In version 4.1.0 the dependency biobb_common has been updated to 4.1.0 version.

New features

  • Update to biobb_common 4.1.0 (general)

What’s new in version 4.0.0?

In version 4.0.0 the dependency biobb_common has been updated to 4.0.0 version.

New features

  • Update to biobb_common 4.0.0 (general)

What’s new in version 3.9.0?

In version 3.9.0 the dependency biobb_common has been updated to 3.9.0 version.

New features

  • Update to biobb_common 3.9.0 (general)

  • All inputs/outputs are checked for correct file format, extension and type (general)

What’s new in version 3.8.0?

In version 3.8.0 the dependency biobb_common has been updated to 3.8.1 version.

New features

  • Update to biobb_common 3.8.1 (general)

What’s new in version 3.7.0?

In version 3.7.0 the dependency biobb_common has been updated to 3.7.0 version. Also, scikit-learn has been updated to 0.24.2 version.

New features

  • Update to biobb_common 3.7.0 (general)

  • Update to scikit-learn 0.24.2

  • Update to pandas 1.3.0

What’s new in version 3.6.1?

In version 3.6.1 TensorFlow has been updated to 2.4.0 version.

New features

  • Update to TensorFlow 2.4.0

What’s new in version 3.6.0?

In version 3.6.0 the dependency biobb_common has been updated to 3.6.0 version.

New features

  • Update to biobb_common 3.6.0 (general)

What’s new in version 3.5.0?

In version 3.5.0 the dependency biobb_common has been updated to 3.5.1 version. Also, there has been implemented the new version of docstrings, therefore the JSON Schemas have been modified. There has been implemented some new utils as well the new Resampling package. Finally, the method for inserting new datasets to the tools has been improved

New features

  • Update to biobb_common 3.5.1 (general)

  • New extended and improved JSON schemas (Galaxy and CWL-compliant) (general)

  • New Drop Columns and Scale Columns utils

  • New Resampling module: Oversampling, Undersampling and Resampling.

Other changes

  • New docstrings

  • New input datasets method: now unlabeled datasets are supported.

What’s new in version 3.0.2?

In version 3.0.2 the dependency biobb_common has been updated to 3.0.1 version.

New features

  • Update to biobb_common 3.0.1

What’s new in version 3.0.1?

In version 3.0.1 TensorFlow, scikit-learn and pandas have been updated and fixed to the latest version of July 2020. Finally a new conda installation recipe has been introduced.

New features

  • Update to TensorFlow 2.2.0 (neural networks module)

  • Update to scikit-learn 0.24.2 (classification, clustering, dimensionality_reduction and regression modules)

  • Update to pandas 1.0.5 (general)

  • New conda installer (installation)

What’s new in version 3.0.0?

In version 3.0.0 Python has been updated to version 3.7. Big changes in the documentation style and content. Finally a new conda installation recipe has been introduced.

New features

  • Update to Python 3.7 (general)

  • New conda installer (installation)

  • Adding type hinting for easier usage (API)

  • Deprecating os.path in favour of pathlib.path (modules)

  • New command line documentation (documentation)

Other changes

  • New documentation styles (documentation)